Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941925.1_cds_XP_016485609.1_76521
CDS Infomation

[gene=LOC107806010] [db_xref=GeneID:107806010] [protein=zinc finger CCCH domain-containing protein 62-like] [protein_id=XP_016485609.1] [location=join(33937..34106,34217..34338,34904..35018,35102..35163,35397..35448,35632..35743,35887..35985,36070..36197,36339..37023)] [gbkey=CDS]
Sequence

ATGGATTCCGAACAGCAACAGTACGATAATGTACTATCAGACGGCGACAGTGAGTACGAC
GATTCCGATGATTCACAAGAGGACCCAACTTTTGACGTTCTTGAGGAGACAAGATCCAGT
CTTTCAAAACTCTCAATCAAAAAACACAAATCCAAGGATATGTCTGCTAGATGTAATGTT
TCTAAGGCTATGGATGAATGCATTGTGGGAGAGCAGGACGTGGAAAAGATGGTGCCGGAG
CTTGATGAAAAAGATCAGAAAAGTTATGAAACTGTTCAGAAAATAATTAAAGCTGGTCAG
ATTAAAAAATTTAAAGTGGAGCAATGTAAGATTTACCTTAGGAAGCATGGGCTAAGATTG
ACAGGGAGCAAAGATGTACTAATTCAGCGCATTAAAGAGCATACTGATATCGTTGATGGT
CGTGGCGAGAAGAAGTATCCCCCATCTAGTTTTGTATTGAACTGCAAAGGGGATGCATGC
ACTGGGGATGTTGTTATGTTTGAACAAAATGTATATGAAATGTTCAGCATCGCATCCAGG
AGTGCTACTGGTCCTCCCTGCGGTACAAGAATAGTTGCAGGGCGGATTGTGAAAGAGAGC
TATGGTGCTAAAAAGCAGCAACACACCTTTACGGTAGAGGTATTGTGGAGTAAAGGGGAG
AAACCGCTGCCTCCACTGCATCCTCTCCTCATTAAGGGCAGAAATCTCTATAGATTGAAA
ACATTGCGACAGAAATGGGACGATGAAGCAGAAAGGCAGGAAATTTTATCAGAAAAGCAT
GCCAGAGGTTCTGTTGCTCGGTCTAACAGCGAAGCACGCGTCCAAGAGAAGGAAATGCGA
AAGATGCGAAAGGAAAATAGGGTAAACACAGATTCACATCCTACCTTAAACACAGAACAC
CAAAACAACAGAGTACACAGTAAAGTGCATTCTCTCTCAACGAACTCGGTCAAAACGACA
GATCAGCATCAGGTAGAGGTGGACAAAGGCCAAAAAGACGAAAAGGAATACCAAAATGTC
ATACAGGAAAATATCTTCTCTAGAGAAAATTGGCCAGAAGAAAGGCCTCATCAGAGGCAG
CCTTTGACTAATGGCTTCGGAAATGGCATCAAATCCAATCCTTCAAAGAGTCCATTAAGA
ATGCCTTACTCCAATACGCATATGCCACCAATGTGGAGGAGCTCTAACAATGGAGGTTAC
GCGAACAACAATAATAGTCCATTAAGAATGCACAACTCTAATGCGCATGTTCCAATGTGG
AGGGGCTATCGAGATGGGGGTTATAACAACTGCAATACTAGTAGAAGTCCATTGCGAGGA
CATGGTCATACCTATACCAATAGTCATTCACAAAATATGAACTATAGATCTCCACAGAGA
ACGGAGTACTGGCAAGCAAGGAATGGTTGGTGTAACGCTGGAGCTGTGGAGCGTCCATTT
CAAGGACAGCGCGAGGAACAAAAGAGGCCTTGCCGCTTTTATGCTCAAAGAAGATGCTAC
TATGGTCATAGTTGCAGGTACTTGCATGATTCTGTAGATATGTAA

Peptide Sequence

PEP ID

XP_016485609.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 62-like [Nicotiana tabacum]
Sequence

MDSEQQQYDNVLSDGDSEYDDSDDSQEDPTFDVLEETRSSLSKLSIKKHKSKDMSARCNV
SKAMDECIVGEQDVEKMVPELDEKDQKSYETVQKIIKAGQIKKFKVEQCKIYLRKHGLRL
TGSKDVLIQRIKEHTDIVDGRGEKKYPPSSFVLNCKGDACTGDVVMFEQNVYEMFSIASR
SATGPPCGTRIVAGRIVKESYGAKKQQHTFTVEVLWSKGEKPLPPLHPLLIKGRNLYRLK
TLRQKWDDEAERQEILSEKHARGSVARSNSEARVQEKEMRKMRKENRVNTDSHPTLNTEH
QNNRVHSKVHSLSTNSVKTTDQHQVEVDKGQKDEKEYQNVIQENIFSRENWPEERPHQRQ
PLTNGFGNGIKSNPSKSPLRMPYSNTHMPPMWRSSNNGGYANNNNSPLRMHNSNAHVPMW
RGYRDGGYNNCNTSRSPLRGHGHTYTNSHSQNMNYRSPQRTEYWQARNGWCNAGAVERPF
QGQREEQKRPCRFYAQRRCYYGHSCRYLHDSVDM

Transcript Sequence

Gene sequence data has not been registered.